Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841915.1_cds_XP_016508166.1_21217
CDS Infomation

[gene=LOC107825770] [db_xref=GeneID:107825770] [protein=trihelix transcription factor PTL-like] [protein_id=XP_016508166.1] [location=join(6630..7051,8944..10108)] [gbkey=CDS]
Sequence

ATGGAGGATCAGTATGGAATGGCAGATCTAAGACAGTATATGAACGGAAGGCAACTATTT
GCTTCTATTCAACCACCGGAGTTGTTACCTGCTACTACTCACCAACACAGGAATCTTATC
GGGCCGGGCCACCATCAGTACGAGATGGTTATGGGTTTGGCCCAAGTTCCAGCTCATGGG
CTTCCTCCTCACCACCAGCAGCACCATGAGTTTCTTCCTGATTCAAGTACCACTGCCACT
GCTGCTACTACGTCGAGTGCTGGGTTTAGTGGGCTGGAGATGGAGGCTGCTGGCGGCGGC
GGCGACGGAAGTGGGCGGTGGCCAAGACAAGAGACTCTTACACTTCTTGAGATTAGATCG
AGACTTGATTCTAAGTTCAAAGAAGCTAATCAGAAAGGGCCTTTATGGGATGAAGTTTCA
AGGATTATGTCTGAGGAACATGGATACCAAAGAACTGGGAAGAAATGCAGAGAGAAATTT
GAGAACTTGTACAAGTATTACAAGAAGACTAAAGAAGGGAGAGCTGGAAGACAAGATGGT
AAACATTATCGATTTTTTAGACAGCTTGAAGCTTTATATGGTGAAACAAGCAATATTAAT
GCAACCTCAGTTTCAGAAACACATCATGTCGGAAGTCATTTTCCTTACAATCCCATTAAC
AACAACAACAACAATCACGATCCTCAAAATTTTCATCAATTAGCTCCTAAGCTATCTGAT
AGTCTTAGCCTCTCAAATTCTTCTGATTTCAACACTACTTCATCTGATGGTAGTGATCTC
AACGAAAATTCGAAAGATCAAAAGGGCAAGAAAGGAAGGGGGAAGAGGAGTTTAAAGGCA
AAGATAAAAGATTTTATTGATGGACAAATGAGGAAGTTAATGGAAAAACAAGAAGCTTGG
TTTGAGAAAATGATGAAGATGATTGAGAATAAAGAAAAAGAAAGGATATTAAGGGAAGAA
GAATGGAGAAATCAAGAGAAAATTCGTATCGAAAGAGAGCATAAATTTTGGGCTAATGAG
AGAGCATGGATTGAAGCTCGTGATGCTACTTTAATGGATGCATTGCACAAATTAACAAGC
AAAGAATCAAAGAGTGCAACGACTAATCCATCTTCTGATCAAGAAACCGAATTTCGGGGC
CTAAATGAGAATCAAAATGATAATGTGAAAGATGAACATTGGCCTGAAAGTGAGATTACT
AGGTTAATACAACTTAGAACTAGCATGGAATCAAGATTTCAGCAAATGGGGTTTACAGGA
GATGAGGTTTTATGGGAAGAAATAGCTGCAAAAATGTCTTGTTTGGGATATGATAAAAGT
TCTTTAATGTGCAAGAATAAATGGGATAGCATAAATAGCTATCTAATGAAGTGCAACAAG
AAAAGAAAAGAGAATTCTACAAGCTCATGTTATAATGTCCAAATCAACAATGAACAACAA
GGAAGATCATATTGTGAAGCAAGACATGTATCAAATGATCAAAATGCAATAAGTGATGGC
AGCTGTTTTAGGTACTTAATGGGAGAAGCTGATCAAAACTTATGGGAGAATTATGAATTG
AAATTAAGCAAGGGTGGTGATAACTGA

Peptide Sequence

PEP ID

XP_016508166.1
PEP Infomation

PREDICTED: trihelix transcription factor PTL-like [Nicotiana tabacum]
Sequence

MEDQYGMADLRQYMNGRQLFASIQPPELLPATTHQHRNLIGPGHHQYEMVMGLAQVPAHG
LPPHHQQHHEFLPDSSTTATAATTSSAGFSGLEMEAAGGGGDGSGRWPRQETLTLLEIRS
RLDSKFKEANQKGPLWDEVSRIMSEEHGYQRTGKKCREKFENLYKYYKKTKEGRAGRQDG
KHYRFFRQLEALYGETSNINATSVSETHHVGSHFPYNPINNNNNNHDPQNFHQLAPKLSD
SLSLSNSSDFNTTSSDGSDLNENSKDQKGKKGRGKRSLKAKIKDFIDGQMRKLMEKQEAW
FEKMMKMIENKEKERILREEEWRNQEKIRIEREHKFWANERAWIEARDATLMDALHKLTS
KESKSATTNPSSDQETEFRGLNENQNDNVKDEHWPESEITRLIQLRTSMESRFQQMGFTG
DEVLWEEIAAKMSCLGYDKSSLMCKNKWDSINSYLMKCNKKRKENSTSSCYNVQINNEQQ
GRSYCEARHVSNDQNAISDGSCFRYLMGEADQNLWENYELKLSKGGDN

Transcript Sequence

Gene sequence data has not been registered.